ixgbe: Add hardware specific initialization code for 82599 devices

This patch adds the hardware initialization code specific to 82599.  This
is similar to the 82598 hardware initialization code.  It also includes all
changes to the existing hardware init code to support 82599.

Signed-off-by: Peter P Waskiewicz Jr <peter.p.waskiewicz.jr@intel.com>
Signed-off-by: Jeff Kirsher <jeffrey.t.kirsher@intel.com>
Signed-off-by: David S. Miller <davem@davemloft.net>